HL_9QQP_051

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UCUAAUUAG

Length

9 nucleotides

Bulged bases

9QQP|1|A2|U|3458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|A2|U|3452
9QQP|1|A2|C|3453
9QQP|1|A2|U|3454
9QQP|1|A2|A|3455
9QQP|1|A2|A|3456
9QQP|1|A2|U|3457
9QQP|1|A2|U|3458
9QQP|1|A2|A|3459
9QQP|1|A2|G|3460

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain P2

Large ribosomal subunit protein uL14

Chain m2

Small subunit ribosomal RNA; SSU rRNA