HL_9QQP_077
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GUGAAUU(OMG)CAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 9QQP|1|C2|A|82, 9QQP|1|C2|U|85
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|C2|G|68
9QQP|1|C2|U|69
9QQP|1|C2|G|70
9QQP|1|C2|A|71
9QQP|1|C2|A|72
9QQP|1|C2|U|73
9QQP|1|C2|U|74
9QQP|1|C2|OMG|75
9QQP|1|C2|C|76
9QQP|1|C2|A|77
9QQP|1|C2|G|78
9QQP|1|C2|G|79
9QQP|1|C2|A|80
9QQP|1|C2|C|81
9QQP|1|C2|A|82
9QQP|1|C2|C|83
9QQP|1|C2|A|84
9QQP|1|C2|U|85
9QQP|1|C2|U|86
9QQP|1|C2|G|87
9QQP|1|C2|A|88
9QQP|1|C2|U|89
9QQP|1|C2|C|90
Current chains
- Chain C2
- 5.8S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain S2
- Large ribosomal subunit protein uL24
- Chain b2
- Large ribosomal subunit protein uL29
- Chain d2
- Large ribosomal subunit protein eL37
- Chain f2
- Large ribosomal subunit protein eL39
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