HL_9QQP_078

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CACUUG

Length

6 nucleotides

Bulged bases

9QQP|1|C2|U|111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|C2|C|107
9QQP|1|C2|A|108
9QQP|1|C2|C|109
9QQP|1|C2|U|110
9QQP|1|C2|U|111
9QQP|1|C2|G|112

Current chains

Chain C2

5.8S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain R2

Large ribosomal subunit protein uL23

Chain d2

Large ribosomal subunit protein eL37

Chain f2

Large ribosomal subunit protein eL39