HL_9QQP_085

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9QQP|1|m2|G|387

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|m2|G|379
9QQP|1|m2|U|380
9QQP|1|m2|C|381
9QQP|1|m2|G|382
9QQP|1|m2|C|383
9QQP|1|m2|C|384
9QQP|1|m2|G|385
9QQP|1|m2|U|386
9QQP|1|m2|G|387
9QQP|1|m2|C|388
9QQP|1|m2|C|389

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain u2

Small ribosomal subunit protein eS8

Chain w2

Small ribosomal subunit protein uS17