HL_9QQP_091

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

ACUUUAA(A2M)UCCUU

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|m2|A|571
9QQP|1|m2|C|572
9QQP|1|m2|U|573
9QQP|1|m2|U|574
9QQP|1|m2|U|575
9QQP|1|m2|A|576
9QQP|1|m2|A|577
9QQP|1|m2|A2M|578
9QQP|1|m2|U|579
9QQP|1|m2|C|580
9QQP|1|m2|C|581
9QQP|1|m2|U|582
9QQP|1|m2|U|583

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain L3

Small ribosomal subunit protein uS4

Chain Q3

Small ribosomal subunit protein eS24

Chain r2

40S ribosomal protein S4, X isoform (eS4)