HL_9QQP_095

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

9QQP|1|m2|U|889, 9QQP|1|m2|U|892, 9QQP|1|m2|G|893

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|m2|U|887
9QQP|1|m2|A|888
9QQP|1|m2|U|889
9QQP|1|m2|U|890
9QQP|1|m2|U|891
9QQP|1|m2|U|892
9QQP|1|m2|G|893
9QQP|1|m2|U|894
9QQP|1|m2|U|895
9QQP|1|m2|G|896
9QQP|1|m2|G|897
9QQP|1|m2|U|898
9QQP|1|m2|U|899
9QQP|1|m2|U|900
9QQP|1|m2|U|901
9QQP|1|m2|C|902
9QQP|1|m2|G|903

Current chains

Chain m2

18S ribosomal RNA

Nearby chains