HL_9QSJ_038

3D structure

PDB id

9QSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSJ|1|a|U|158
9QSJ|1|a|G|159
9QSJ|1|a|A|160
9QSJ|1|a|A|161
9QSJ|1|a|U|162
9QSJ|1|a|C|163
9QSJ|1|a|C|164
9QSJ|1|a|A|165
9QSJ|1|a|U|166
9QSJ|1|a|A|167
9QSJ|1|a|G|168

Current chains

Chain a

E. coli 23S rRNA

Nearby chains

Chain w

Large ribosomal subunit protein bL28