HL_9QWT_022

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9QWT|1|A2|U|1409, 9QWT|1|A2|A|1413, 9QWT|1|A2|A|1414

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|A|1406
9QWT|1|A2|C|1407
9QWT|1|A2|G|1408
9QWT|1|A2|U|1409
9QWT|1|A2|G|1410
9QWT|1|A2|C|1411
9QWT|1|A2|A|1412
9QWT|1|A2|A|1413
9QWT|1|A2|A|1414
9QWT|1|A2|U|1415

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain By

Nascent protein chain

Chain E2

Large ribosomal subunit protein uL3

Chain J2

Large ribosomal subunit protein uL22

Chain d2

Large ribosomal subunit protein eL37