HL_9QWT_054

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCAAACGGUAACG

Length

13 nucleotides

Bulged bases

9QWT|1|A2|A|3866, 9QWT|1|A2|C|3873

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|U|3862
9QWT|1|A2|C|3863
9QWT|1|A2|A|3864
9QWT|1|A2|A|3865
9QWT|1|A2|A|3866
9QWT|1|A2|C|3867
9QWT|1|A2|G|3868
9QWT|1|A2|G|3869
9QWT|1|A2|U|3870
9QWT|1|A2|A|3871
9QWT|1|A2|A|3872
9QWT|1|A2|C|3873
9QWT|1|A2|G|3874

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D1

Large ribosomal subunit protein uL16

Chain N2

Large ribosomal subunit protein eL21

Chain V2

Large ribosomal subunit protein eL29