HL_9QZP_014

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GCGGACUGUCCCCAGUGCGCC

Length

21 nucleotides

Bulged bases

9QZP|1|A2|G|1010, 9QZP|1|A2|U|1011, 9QZP|1|A2|C|1013, 9QZP|1|A2|C|1014

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|G|1003
9QZP|1|A2|C|1004
9QZP|1|A2|G|1005
9QZP|1|A2|G|1006
9QZP|1|A2|A|1007
9QZP|1|A2|C|1008
9QZP|1|A2|U|1009
9QZP|1|A2|G|1010
9QZP|1|A2|U|1011
9QZP|1|A2|C|1012
9QZP|1|A2|C|1013
9QZP|1|A2|C|1014
9QZP|1|A2|C|1015
9QZP|1|A2|A|1016
9QZP|1|A2|G|1017
9QZP|1|A2|U|1018
9QZP|1|A2|G|1019
9QZP|1|A2|C|1020
9QZP|1|A2|G|1021
9QZP|1|A2|C|1022
9QZP|1|A2|C|1023

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain B2

5S ribosomal RNA; 5S rRNA

Chain D1

Large ribosomal subunit protein uL16

Chain G2

Large ribosomal subunit protein uL18