HL_9QZP_071

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

9QZP|1|A2|G|4346, 9QZP|1|A2|C|4350

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|4340
9QZP|1|A2|U|4341
9QZP|1|A2|G|4342
9QZP|1|A2|A|4343
9QZP|1|A2|A|4344
9QZP|1|A2|C|4345
9QZP|1|A2|G|4346
9QZP|1|A2|C|4347
9QZP|1|A2|C|4348
9QZP|1|A2|U|4349
9QZP|1|A2|C|4350
9QZP|1|A2|U|4351
9QZP|1|A2|A|4352
9QZP|1|A2|A|4353
9QZP|1|A2|G|4354

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C1

Large ribosomal subunit protein uL6

Chain I2

Large ribosomal subunit protein uL13

Chain g2

Ubiquitin-ribosomal protein eL40 fusion protein