HL_9QZP_105

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

9QZP|1|m2|U|889, 9QZP|1|m2|U|892, 9QZP|1|m2|G|893

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|m2|U|887
9QZP|1|m2|A|888
9QZP|1|m2|U|889
9QZP|1|m2|U|890
9QZP|1|m2|U|891
9QZP|1|m2|U|892
9QZP|1|m2|G|893
9QZP|1|m2|U|894
9QZP|1|m2|U|895
9QZP|1|m2|G|896
9QZP|1|m2|G|897
9QZP|1|m2|U|898
9QZP|1|m2|U|899
9QZP|1|m2|U|900
9QZP|1|m2|U|901
9QZP|1|m2|C|902
9QZP|1|m2|G|903

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain w2

Small ribosomal subunit protein uS17