3D structure

PDB id
9QZP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse Ribosome Classical Pre translocation state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.43 Å

Loop

Sequence
GAC(B8N)CAACAC
Length
10 nucleotides
Bulged bases
9QZP|1|m2|A|1255
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QZP|1|m2|G|1247
9QZP|1|m2|A|1248
9QZP|1|m2|C|1249
9QZP|1|m2|B8N|1250
9QZP|1|m2|C|1251
9QZP|1|m2|A|1252
9QZP|1|m2|A|1253
9QZP|1|m2|C|1254
9QZP|1|m2|A|1255
9QZP|1|m2|C|1256

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain Bv
Transfer RNA; tRNA
Chain Bz
Transfer RNA; tRNA
Chain C3
Small ribosomal subunit protein uS10
Chain H3
Small ribosomal subunit protein uS14
Chain x2
Small ribosomal subunit protein uS19
Chain y2
Small ribosomal subunit protein uS9

Coloring options:

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