HL_9R8V_001

3D structure

PDB id

9R8V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human pre-Bact-OTS complex (whole map)

Experimental method

ELECTRON MICROSCOPY

Resolution

8.5 Å

Loop

Sequence

CUGGUAUUGCAGUACCUCCAG

Length

21 nucleotides

Bulged bases

9R8V|1|2|G|163, 9R8V|1|2|C|164, 9R8V|1|2|A|165, 9R8V|1|2|G|166, 9R8V|1|2|U|167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R8V|1|2|C|155
9R8V|1|2|U|156
9R8V|1|2|G|157
9R8V|1|2|G|158
9R8V|1|2|U|159
9R8V|1|2|A|160
9R8V|1|2|U|161
9R8V|1|2|U|162
9R8V|1|2|G|163
9R8V|1|2|C|164
9R8V|1|2|A|165
9R8V|1|2|G|166
9R8V|1|2|U|167
9R8V|1|2|A|168
9R8V|1|2|C|169
9R8V|1|2|C|170
9R8V|1|2|U|171
9R8V|1|2|C|172
9R8V|1|2|C|173
9R8V|1|2|A|174
9R8V|1|2|G|175

Current chains

Chain 2

U2 snRNA

Nearby chains

Chain 23

Small nuclear ribonucleoprotein Sm D3

Chain 2A

U2 small nuclear ribonucleoprotein A'

Chain 2B

U2 small nuclear ribonucleoprotein B''

Chain 2b

Small nuclear ribonucleoprotein-associated proteins B and B'