HL_9R9P_058

3D structure

PDB id

9R9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUUGUUCACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9P|1|C1|G|2918
9R9P|1|C1|A|2919
9R9P|1|C1|U|2920
9R9P|1|C1|U|2921
9R9P|1|C1|G|2922
9R9P|1|C1|U|2923
9R9P|1|C1|U|2924
9R9P|1|C1|C|2925
9R9P|1|C1|A|2926
9R9P|1|C1|C|2927
9R9P|1|C1|C|2928

Current chains

Chain C1

25S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23-A