HL_9RBF_079

3D structure

PDB id

9RBF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with the membrane protein insertase SecYEG-YidC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.44 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

9RBF|1|a|C|1870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RBF_079 not in the Motif Atlas

Homologous match to HL_7A0S_047

Geometric discrepancy: 0.3977

The information below is about HL_7A0S_047

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9RBF|1|a|C|1868
9RBF|1|a|G|1869
9RBF|1|a|C|1870
9RBF|1|a|A|1871
9RBF|1|a|A|1872
9RBF|1|a|G|1873

Current chains

Chain a

23S rRNA

Nearby chains