3D structure

PDB id
9RG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In vitro reconstituted NAA40-NAC bound 80S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
GGGCCGAAACGAUCU
Length
15 nucleotides
Bulged bases
9RG7|1|L5|A|1765, 9RG7|1|L5|A|1766, 9RG7|1|L5|A|1767, 9RG7|1|L5|G|1769
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RG7|1|L5|G|1759
9RG7|1|L5|G|1760
9RG7|1|L5|G|1761
9RG7|1|L5|C|1762
9RG7|1|L5|C|1763
9RG7|1|L5|G|1764
9RG7|1|L5|A|1765
9RG7|1|L5|A|1766
9RG7|1|L5|A|1767
9RG7|1|L5|C|1768
9RG7|1|L5|G|1769
9RG7|1|L5|A|1770
9RG7|1|L5|U|1771
9RG7|1|L5|C|1772
9RG7|1|L5|U|1773

Current chains

Chain L5
28S rRNA

Nearby chains

Chain SP
40S ribosomal protein S15
Chain SS
40S ribosomal protein S18

Coloring options:

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