HL_9RG7_065

3D structure

PDB id

9RG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro reconstituted NAA40-NAC bound 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RG7_065 not in the Motif Atlas

Homologous match to HL_9H3G_065

Geometric discrepancy: 0.0489

The information below is about HL_9H3G_065

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9RG7|1|L5|C|4540
9RG7|1|L5|G|4541
9RG7|1|L5|U|4542
9RG7|1|L5|G|4543
9RG7|1|L5|A|4544
9RG7|1|L5|G|4545

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8