HL_9ROR_010

3D structure

PDB id

9ROR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ROR_010 not in the Motif Atlas

Geometric match to HL_9H3G_094

Geometric discrepancy: 0.0866

The information below is about HL_9H3G_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9ROR|1|A|C|1023
9ROR|1|A|G|1024
9ROR|1|A|A|1025
9ROR|1|A|A|1026
9ROR|1|A|A|1027
9ROR|1|A|G|1028

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain L

28S ribosomal protein S15, mitochondrial

Chain Q

MRPS21 isoform 1