HL_9ROR_017

3D structure

PDB id

9ROR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

AUGAAACUU

Length

9 nucleotides

Bulged bases

9ROR|1|A|C|1405, 9ROR|1|A|U|1406

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ROR_017 not in the Motif Atlas

Geometric match to HL_9E5O_004

Geometric discrepancy: 0.1456

The information below is about HL_9E5O_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13999.5

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

24

Unit IDs

9ROR|1|A|A|1399
9ROR|1|A|U|1400
9ROR|1|A|G|1401
9ROR|1|A|A|1402
9ROR|1|A|A|1403
9ROR|1|A|A|1404
9ROR|1|A|C|1405
9ROR|1|A|U|1406
9ROR|1|A|U|1407

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain K

28S ribosomal protein S14, mitochondrial

Chain Z

28S ribosomal protein S33, mitochondrial