HL_9ROT_011

3D structure

PDB id

9ROT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

9ROT|1|A|U|1077

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ROT|1|A|G|1074
9ROT|1|A|A|1075
9ROT|1|A|U|1076
9ROT|1|A|U|1077
9ROT|1|A|A|1078
9ROT|1|A|G|1079
9ROT|1|A|A|1080
9ROT|1|A|U|1081
9ROT|1|A|A|1082
9ROT|1|A|C|1083
9ROT|1|A|C|1084

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain I

28S ribosomal protein S11, mitochondrial

Chain Q

Small ribosomal subunit protein bS21m

Chain b

12S rRNA N4-methylcytidine (m4C) methyltransferase