HL_9ROT_019
3D structure
- PDB id
- 9ROT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GACAUUUAACUAAAACCC
- Length
- 18 nucleotides
- Bulged bases
- 9ROT|1|A|A|1519, 9ROT|1|A|U|1520, 9ROT|1|A|C|1525, 9ROT|1|A|U|1526, 9ROT|1|A|C|1532
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9ROT|1|A|G|1516
9ROT|1|A|A|1517
9ROT|1|A|C|1518
9ROT|1|A|A|1519
9ROT|1|A|U|1520
9ROT|1|A|U|1521
9ROT|1|A|U|1522
9ROT|1|A|A|1523
9ROT|1|A|A|1524
9ROT|1|A|C|1525
9ROT|1|A|U|1526
9ROT|1|A|A|1527
9ROT|1|A|A|1528
9ROT|1|A|A|1529
9ROT|1|A|A|1530
9ROT|1|A|C|1531
9ROT|1|A|C|1532
9ROT|1|A|C|1533
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 0
- 28S ribosomal protein S34, mitochondrial
- Chain L
- 28S ribosomal protein S15, mitochondrial
- Chain V
- 28S ribosomal protein S27, mitochondrial
Coloring options: