3D structure

PDB id
9ROV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GACAUUUAACUAAAACCC
Length
18 nucleotides
Bulged bases
9ROV|1|A|U|1520, 9ROV|1|A|U|1521, 9ROV|1|A|U|1522, 9ROV|1|A|C|1525, 9ROV|1|A|U|1526, 9ROV|1|A|C|1532
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ROV|1|A|G|1516
9ROV|1|A|A|1517
9ROV|1|A|C|1518
9ROV|1|A|A|1519
9ROV|1|A|U|1520
9ROV|1|A|U|1521
9ROV|1|A|U|1522
9ROV|1|A|A|1523
9ROV|1|A|A|1524
9ROV|1|A|C|1525
9ROV|1|A|U|1526
9ROV|1|A|A|1527
9ROV|1|A|A|1528
9ROV|1|A|A|1529
9ROV|1|A|A|1530
9ROV|1|A|C|1531
9ROV|1|A|C|1532
9ROV|1|A|C|1533

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 0
28S ribosomal protein S34, mitochondrial
Chain L
28S ribosomal protein S15, mitochondrial
Chain V
28S ribosomal protein S27, mitochondrial

Coloring options:

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