HL_9RPF_015
3D structure
- PDB id
- 9RPF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and mS37 (State M4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UGAUGAA
- Length
- 7 nucleotides
- Bulged bases
- 9RPF|1|A|A|1283, 9RPF|1|A|U|1284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RPF_015 not in the Motif Atlas
- Geometric match to HL_8G9Z_003
- Geometric discrepancy: 0.3555
- The information below is about HL_8G9Z_003
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_37569.4
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9RPF|1|A|U|1281
9RPF|1|A|G|1282
9RPF|1|A|A|1283
9RPF|1|A|U|1284
9RPF|1|A|G|1285
9RPF|1|A|A|1286
9RPF|1|A|A|1287
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain B
- 28S ribosomal protein S2, mitochondrial
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain E
- 28S ribosomal protein S6, mitochondrial
- Chain S
- 28S ribosomal protein S23, mitochondrial
Coloring options: