HL_9RPV_002
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GCCCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RPV_002 not in the Motif Atlas
- Homologous match to HL_9MTS_102
- Geometric discrepancy: 0.1189
- The information below is about HL_9MTS_102
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9RPV|1|B4|G|30
9RPV|1|B4|C|31
9RPV|1|B4|C|32
9RPV|1|B4|C|33
9RPV|1|B4|A|34
9RPV|1|B4|U|35
9RPV|1|B4|A|36
9RPV|1|B4|A|37
9RPV|1|B4|C|38
Current chains
- Chain B4
- P/E tRNA on the collided 80S
Nearby chains
- Chain A4
- mRNA of the collided 80S
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SP
- 40S ribosomal protein S15
- Chain SQ
- 40S ribosomal protein S16
Coloring options: