HL_9RPV_019

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGUAAACUCC

Length

10 nucleotides

Bulged bases

9RPV|1|L5|G|315, 9RPV|1|L5|U|316

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|G|314
9RPV|1|L5|G|315
9RPV|1|L5|U|316
9RPV|1|L5|A|317
9RPV|1|L5|A|318
9RPV|1|L5|A|319
9RPV|1|L5|C|320
9RPV|1|L5|U|321
9RPV|1|L5|C|322
9RPV|1|L5|C|323

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Li

60S ribosomal protein L36

Chain Lo

60S ribosomal protein L36a