HL_9RPV_128

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

(PSU)UUAAUUAAAA

Length

11 nucleotides

Bulged bases

9RPV|1|M5|A|3642, 9RPV|1|M5|A|3643, 9RPV|1|M5|U|3644, 9RPV|1|M5|A|3648

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|M5|PSU|3639
9RPV|1|M5|U|3640
9RPV|1|M5|U|3641
9RPV|1|M5|A|3642
9RPV|1|M5|A|3643
9RPV|1|M5|U|3644
9RPV|1|M5|U|3645
9RPV|1|M5|A|3646
9RPV|1|M5|A|3647
9RPV|1|M5|A|3648
9RPV|1|M5|A|3649

Current chains

Chain M5

28S rRNA of the stalled 80S

Nearby chains

Chain MA

Large ribosomal subunit protein uL2

Chain Mj

Large ribosomal subunit protein eL37