HL_9RPV_189
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GUUGAUCCUGC
- Length
- 11 nucleotides
- Bulged bases
- 9RPV|1|S3|U|9
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RPV_189 not in the Motif Atlas
- Homologous match to HL_9H3G_079
- Geometric discrepancy: 0.0693
- The information below is about HL_9H3G_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_73535.4
- Basepair signature
- cWW-tHW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9RPV|1|S3|G|7
9RPV|1|S3|U|8
9RPV|1|S3|U|9
9RPV|1|S3|G|10
9RPV|1|S3|A|11
9RPV|1|S3|U|12
9RPV|1|S3|C|13
9RPV|1|S3|C|14
9RPV|1|S3|U|15
9RPV|1|S3|G|16
9RPV|1|S3|C|17
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain RC
- 40S ribosomal protein S2
- Chain RX
- 40S ribosomal protein S23
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