HL_9RTU_010

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGACAGCC

Length

9 nucleotides

Bulged bases

9RTU|1|A|G|329, 9RTU|1|A|A|330, 9RTU|1|A|C|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RTU_010 not in the Motif Atlas

Geometric match to HL_8B0X_043

Geometric discrepancy: 0.0907

The information below is about HL_8B0X_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27670.4

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

16

Unit IDs

9RTU|1|A|G|327
9RTU|1|A|U|328
9RTU|1|A|G|329
9RTU|1|A|A|330
9RTU|1|A|C|331
9RTU|1|A|A|332
9RTU|1|A|G|333
9RTU|1|A|C|334
9RTU|1|A|C|335

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24