HL_9RTU_018

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RTU_018 not in the Motif Atlas

Geometric match to HL_8GLP_118

Geometric discrepancy: 0.08

The information below is about HL_8GLP_118

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9RTU|1|A|G|629
9RTU|1|A|G|630
9RTU|1|A|A|631
9RTU|1|A|A|632
9RTU|1|A|A|633
9RTU|1|A|C|634

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain L

50S ribosomal protein L15