HL_9RTU_087

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RTU_087 not in the Motif Atlas

Geometric match to HL_8CRE_211

Geometric discrepancy: 0.0702

The information below is about HL_8CRE_211

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

9RTU|1|a|C|726
9RTU|1|a|G|727
9RTU|1|a|A|728
9RTU|1|a|A|729
9RTU|1|a|G|730
9RTU|1|a|G|731

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain o

Small ribosomal subunit protein uS15

Chain r

30S ribosomal protein S18

Chain u

30S ribosomal protein S21