HL_9RTV_007

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAACCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RTV_007 not in the Motif Atlas

Geometric match to HL_8B0X_039

Geometric discrepancy: 0.1114

The information below is about HL_8B0X_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_63151.1

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

2

Unit IDs

9RTV|1|A|C|225
9RTV|1|A|A|226
9RTV|1|A|A|227
9RTV|1|A|C|228
9RTV|1|A|C|229
9RTV|1|A|G|230

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15