3D structure

PDB id
9RTV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GGCUUAGAAGCAGCC
Length
15 nucleotides
Bulged bases
9RTV|1|A|G|1063, 9RTV|1|A|C|1064, 9RTV|1|A|U|1066, 9RTV|1|A|A|1067, 9RTV|1|A|A|1070
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RTV|1|A|G|1062
9RTV|1|A|G|1063
9RTV|1|A|C|1064
9RTV|1|A|U|1065
9RTV|1|A|U|1066
9RTV|1|A|A|1067
9RTV|1|A|G|1068
9RTV|1|A|A|1069
9RTV|1|A|A|1070
9RTV|1|A|G|1071
9RTV|1|A|C|1072
9RTV|1|A|A|1073
9RTV|1|A|G|1074
9RTV|1|A|C|1075
9RTV|1|A|C|1076

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 5
50S ribosomal protein L10
Chain I
50S ribosomal protein L11
Chain x
Elongation factor G

Coloring options:

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