HL_9RTV_045

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

9RTV|1|A|A|1808

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RTV_045 not in the Motif Atlas

Homologous match to HL_7A0S_046

Geometric discrepancy: 0.5813

The information below is about HL_7A0S_046

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

9RTV|1|A|C|1806
9RTV|1|A|G|1807
9RTV|1|A|A|1808
9RTV|1|A|A|1809
9RTV|1|A|A|1810
9RTV|1|A|G|1811

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain X

50S ribosomal protein L28