HL_9RTV_083

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9RTV|1|a|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RTV_083 not in the Motif Atlas

Homologous match to HL_8B0X_011

Geometric discrepancy: 0.4114

The information below is about HL_8B0X_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.5

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9RTV|1|a|G|462
9RTV|1|a|U|463
9RTV|1|a|U|464
9RTV|1|a|A|465
9RTV|1|a|A|466
9RTV|1|a|U|467
9RTV|1|a|A|468
9RTV|1|a|C|469
9RTV|1|a|C|470

Current chains

Chain a

16S ribosomal RNA

Nearby chains