HL_9RU6_006
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- GAGAGC
- Length
- 6 nucleotides
- Bulged bases
- 9RU6|1|A|G|1886, 9RU6|1|A|A|1887, 9RU6|1|A|G|1888
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RU6_006 not in the Motif Atlas
- Geometric match to HL_8GLP_006
- Geometric discrepancy: 0.1598
- The information below is about HL_8GLP_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.10
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
9RU6|1|A|G|1884
9RU6|1|A|A|1885
9RU6|1|A|G|1886
9RU6|1|A|A|1887
9RU6|1|A|G|1888
9RU6|1|A|C|1889
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain g
- 39S ribosomal protein L49, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: