HL_9RU6_065
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9RU6_065 not in the Motif Atlas
- Homologous match to HL_9MTS_103
- Geometric discrepancy: 0.1879
- The information below is about HL_9MTS_103
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.6
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
9RU6|1|Ax|G|53
9RU6|1|Ax|U|54
9RU6|1|Ax|U|55
9RU6|1|Ax|C|56
9RU6|1|Ax|A|57
9RU6|1|Ax|A|58
9RU6|1|Ax|U|59
9RU6|1|Ax|U|60
9RU6|1|Ax|C|61
Current chains
- Chain Ax
- P-site RNA (70-MER)
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: