HL_9RU8_014

3D structure

PDB id

9RU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUCGCACGAAAG

Length

12 nucleotides

Bulged bases

9RU8|1|L5|C|1365, 9RU8|1|L5|A|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU8|1|L5|C|1363
9RU8|1|L5|U|1364
9RU8|1|L5|C|1365
9RU8|1|L5|G|1366
9RU8|1|L5|C|1367
9RU8|1|L5|A|1368
9RU8|1|L5|C|1369
9RU8|1|L5|G|1370
9RU8|1|L5|A|1371
9RU8|1|L5|A|1372
9RU8|1|L5|A|1373
9RU8|1|L5|G|1374

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LC

60S ribosomal protein L4

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain LY

Large ribosomal subunit protein uL24