HL_9RU8_019

3D structure

PDB id

9RU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9RU8|1|L5|U|1596, 9RU8|1|L5|A|1600, 9RU8|1|L5|A|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU8|1|L5|A|1593
9RU8|1|L5|C|1594
9RU8|1|L5|G|1595
9RU8|1|L5|U|1596
9RU8|1|L5|G|1597
9RU8|1|L5|C|1598
9RU8|1|L5|A|1599
9RU8|1|L5|A|1600
9RU8|1|L5|A|1601
9RU8|1|L5|U|1602

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LP

Large ribosomal subunit protein uL22

Chain Lj

Large ribosomal subunit protein eL37