HL_9RUA_009

3D structure

PDB id

9RUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9RUA_009 not in the Motif Atlas

Homologous match to HL_8GLP_010

Geometric discrepancy: 0.0292

The information below is about HL_8GLP_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9RUA|1|L5|C|368
9RUA|1|L5|G|369
9RUA|1|L5|U|370
9RUA|1|L5|A|371
9RUA|1|L5|A|372
9RUA|1|L5|G|373

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain Lj

Large ribosomal subunit protein eL37

Chain Ll

Large ribosomal subunit protein eL39