HL_9S3B_012

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GGUAAACUCC

Length

10 nucleotides

Bulged bases

9S3B|1|L5|G|315, 9S3B|1|L5|U|316

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|G|314
9S3B|1|L5|G|315
9S3B|1|L5|U|316
9S3B|1|L5|A|317
9S3B|1|L5|A|318
9S3B|1|L5|A|319
9S3B|1|L5|C|320
9S3B|1|L5|U|321
9S3B|1|L5|C|322
9S3B|1|L5|C|323

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Li

60S ribosomal protein L36

Chain Lo

60S ribosomal protein L36a