HL_9S3B_023

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9S3B|1|L5|U|1596, 9S3B|1|L5|A|1600, 9S3B|1|L5|A|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|A|1593
9S3B|1|L5|C|1594
9S3B|1|L5|G|1595
9S3B|1|L5|U|1596
9S3B|1|L5|G|1597
9S3B|1|L5|C|1598
9S3B|1|L5|A|1599
9S3B|1|L5|A|1600
9S3B|1|L5|A|1601
9S3B|1|L5|U|1602

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CZ

nascent chain

Chain LB

60S ribosomal protein L3

Chain LP

60S ribosomal protein L17

Chain Lj

Large ribosomal subunit protein eL37