HL_9S3B_036

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GAUGGCCUCCGUU

Length

13 nucleotides

Bulged bases

9S3B|1|L5|C|2488, 9S3B|1|L5|C|2489, 9S3B|1|L5|U|2490

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|G|2483
9S3B|1|L5|A|2484
9S3B|1|L5|U|2485
9S3B|1|L5|G|2486
9S3B|1|L5|G|2487
9S3B|1|L5|C|2488
9S3B|1|L5|C|2489
9S3B|1|L5|U|2490
9S3B|1|L5|C|2491
9S3B|1|L5|C|2492
9S3B|1|L5|G|2493
9S3B|1|L5|U|2494
9S3B|1|L5|U|2495

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LX

60S ribosomal protein L23a