HL_9S3D_090

3D structure

PDB id

9S3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC bound human RNC with 58 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

GGACUCUUUCGAGGCC

Length

16 nucleotides

Bulged bases

9S3D|1|S2|A|536, 9S3D|1|S2|C|539, 9S3D|1|S2|U|542

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3D|1|S2|G|534
9S3D|1|S2|G|535
9S3D|1|S2|A|536
9S3D|1|S2|C|537
9S3D|1|S2|U|538
9S3D|1|S2|C|539
9S3D|1|S2|U|540
9S3D|1|S2|U|541
9S3D|1|S2|U|542
9S3D|1|S2|C|543
9S3D|1|S2|G|544
9S3D|1|S2|A|545
9S3D|1|S2|G|546
9S3D|1|S2|G|547
9S3D|1|S2|C|548
9S3D|1|S2|C|549

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Se

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein