HL_9S7B_020
3D structure
- PDB id
- 9S7B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9S7B|1|A|A|2500, 9S7B|1|A|C|2501, 9S7B|1|A|C|2502, 9S7B|1|A|A|2506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9S7B_020 not in the Motif Atlas
- Homologous match to HL_8B0X_073
- Geometric discrepancy: 0.1055
- The information below is about HL_8B0X_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.3
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 10
Unit IDs
9S7B|1|A|U|2497
9S7B|1|A|U|2498
9S7B|1|A|U|2499
9S7B|1|A|A|2500
9S7B|1|A|C|2501
9S7B|1|A|C|2502
9S7B|1|A|A|2503
9S7B|1|A|A|2504
9S7B|1|A|A|2505
9S7B|1|A|A|2506
9S7B|1|A|A|2507
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34m
- Chain Av
- COX1 nascent chain
- Chain D
- Large ribosomal subunit protein uL2m
- Chain T
- Large ribosomal subunit protein uL22m
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