HL_9S7B_038

3D structure

PDB id

9S7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAAGAACAG

Length

9 nucleotides

Bulged bases

9S7B|1|A|A|3217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7B_038 not in the Motif Atlas

Geometric match to HL_7A0S_067

Geometric discrepancy: 0.1246

The information below is about HL_7A0S_067

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37889.3

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

13

Unit IDs

9S7B|1|A|C|3216
9S7B|1|A|A|3217
9S7B|1|A|A|3218
9S7B|1|A|G|3219
9S7B|1|A|A|3220
9S7B|1|A|A|3221
9S7B|1|A|C|3222
9S7B|1|A|A|3223
9S7B|1|A|G|3224

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 0

Large ribosomal subunit protein bL32m

Chain E

Large ribosomal subunit protein uL3m

Chain O

Large ribosomal subunit protein bL17m

Chain Q

Large ribosomal subunit protein bL19m