HL_9S7B_045

3D structure

PDB id

9S7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7B_045 not in the Motif Atlas

Homologous match to HL_8B0X_009

Geometric discrepancy: 0.303

The information below is about HL_8B0X_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9S7B|1|AA|C|195
9S7B|1|AA|G|196
9S7B|1|AA|A|197
9S7B|1|AA|A|198
9S7B|1|AA|A|199
9S7B|1|AA|G|200

Current chains

Chain AA

Large ribosomal subunit protein mL32

Nearby chains

Chain A0

Small ribosomal subunit protein mS34

Chain AM

Small ribosomal subunit protein bS16m

Chain AO

Small ribosomal subunit protein mS40

Chain AU

Small ribosomal subunit protein mS26