HL_9S7B_053

3D structure

PDB id

9S7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGAUGAA

Length

7 nucleotides

Bulged bases

9S7B|1|AA|A|636, 9S7B|1|AA|U|637

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7B_053 not in the Motif Atlas

Geometric match to HL_9AXU_017

Geometric discrepancy: 0.3742

The information below is about HL_9AXU_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37569.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

9S7B|1|AA|U|634
9S7B|1|AA|G|635
9S7B|1|AA|A|636
9S7B|1|AA|U|637
9S7B|1|AA|G|638
9S7B|1|AA|A|639
9S7B|1|AA|A|640

Current chains

Chain AA

Large ribosomal subunit protein mL32

Nearby chains

Chain AB

Small ribosomal subunit protein uS2m

Chain AD

Small ribosomal subunit protein uS5m

Chain AE

Small ribosomal subunit protein bS6m

Chain AS

Small ribosomal subunit protein mS23