HL_9S7C_030

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUAACU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7C_030 not in the Motif Atlas

Geometric match to HL_9H3G_105

Geometric discrepancy: 0.1004

The information below is about HL_9H3G_105

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9S7C|1|A|A|2902
9S7C|1|A|U|2903
9S7C|1|A|A|2904
9S7C|1|A|A|2905
9S7C|1|A|C|2906
9S7C|1|A|U|2907

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL33m

Chain 3

Large ribosomal subunit protein bL35m

Chain Ax

Transfer RNA; tRNA