HL_9S7C_034

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGUAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7C_034 not in the Motif Atlas

Homologous match to HL_8B0X_090

Geometric discrepancy: 0.15

The information below is about HL_8B0X_090

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9S7C|1|A|A|3081
9S7C|1|A|G|3082
9S7C|1|A|U|3083
9S7C|1|A|A|3084
9S7C|1|A|A|3085
9S7C|1|A|U|3086

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain D

Large ribosomal subunit protein uL2m